Metabolic state of human blastocysts measured by fluorescence lifetime imaging microscopy

M. Venturas, J. S. Shah, X. Yang, T. H. Sanchez, W. Conway, D. Sakkas, D. J. Needleman

Human Reproduction, 2022 Jan 6

A coarse-grained NADH redox model enables inference of subcellular metabolic fluxes from fluorescence lifetime imaging

Xingbo Yang, Gloria Ha, Daniel J Needleman

eLife, 10:e73808, 2021 Nov 22

Metabolic imaging of human cumulus cells reveals associations among metabolic profiles of cumulus cells, patient clinical factors, and oocyte maturity

Marta Venturas, Xingbo Yang, Kishlay Kumar, Dagan Wells, Catherine Racowsky, Daniel J. Needleman

Fertility and Sterility, 2021 Sep 2

Physical bioenergetics: Energy fluxes, budgets, and constraints in cells.

Xingbo Yang, Matthias Heinemann, Jonathon Howard, Greg Huber, Srividya Iyer-Biswas, Guillaume Le Treut, Michael Lynch, Kristi L Montooth, Daniel J Needleman, Simone Pigolotti, Jonathan Rodenfels, Pierre Ronceray, Sadasivan Shankar, Sadasivan Shankar, Sadasivan Shankar, Iman Tavassoly, Shashi Thutupalli, Denis V Titov, Jin Wang, Peter J Foster

Proceedings of the National Academy of Sciences of the United States of America, vol. 118(26), 2021 May 28

Spatial gradient sensing and chemotaxis via excitability in Dictyostelium discoideum.

Daniel P. Shams, Xingbo Yang, Pankaj Mehta, David J. Schwab

Physical Review E, vol. 101(6), 2020 May 11, pp. 62410-62410

Combined noninvasive metabolic and spindle imaging as potential tools for embryo and oocyte assessment.

Tim Sanchez, Marta Venturas, S Ali Aghvami, Xingbo Yang, Seth Fraden, Denny Sakkas, Daniel J Needleman

Human Reproduction, vol. 34(12), 2019 Oct 30, pp. 2349-2361

Distinct contributions of tensile and shear stress on E-cadherin levels during morphogenesis.

Girish R. Kale, Xingbo Yang, Jean Marc Philippe, Madhav Mani, Pierre François Lenne, Thomas Lecuit

Nature Communications, vol. 9(1), 2018 Oct 26, pp. 5021-5021

Correlating cell shape and cellular stress in motile confluent tissues

Xingbo Yang, Dapeng Bi, Michael Czajkowski, Matthias Merkel, M. Lisa Manning, M. Cristina Marchetti

Proceedings of the National Academy of Sciences of the United States of America, vol. 114(48), 2017 Oct 27, pp. 12663-12668

Polymertropism of rod-shaped bacteria: movement along aligned polysaccharide fibers

David J. Lemon, Xingbo Yang, Pragya Srivastava, Yan-Yeung Luk, Anthony G. Garza

Scientific Reports, vol. 7, 2017 Aug 11, p. 7643

Coordination of size-control, reproduction and generational memory in freshwater planarians

Xingbo Yang, Kelson J. Kaj, David J. Schwab, Eva Maria S. Collins

Physical Biology, vol. 14(3), 2017 Apr 22, pp. 36003-36003

Motility-driven glass and jamming transitions in biological tissues.

Dapeng Bi, Xingbo Yang, M. Cristina Marchetti, M. Lisa Manning

Physical Review X, vol. 6(2), 2016 Mar 20

Hydrodynamics of Turning Flocks

Xingbo Yang, M. Cristina Marchetti

Phys. Rev. Lett., vol. 115(25), American Physical Society, 2015 Dec, p. 258101

Aggregation and segregation of confined active particles.

Xingbo Yang, M. Lisa Manning, M. Cristina Marchetti

Soft Matter, vol. 10(34), 2014 Jul 5, pp. 6477-6484

Spiral and never-settling patterns in active systems

X. Yang, D. Marenduzzo, M. C. Marchetti

Phys. Rev. E, vol. 89(1), American Physical Society, 2014 Jan, p. 012711